Acer008447.1
Basic Information
- Insect
- Abscondita cerata
- Gene Symbol
- -
- Assembly
- GCA_030710515.1
- Location
- JALBCR010000181.1:191239-199576[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4e-07 5.2e-05 25.2 0.2 4 37 78 111 77 119 0.89
Sequence Information
- Coding Sequence
- ATGGTAGCATATGTTTTACCAATATTACAGAAGTTGTTGCAATTTAATGTATTTGCTAAACAAGCACAGCAAGTGACCCGTGCCGCGAGCGTGTTGCAACCTGAAGTCGGAAACAACCACGGCGTGGAGCGcacgtttgtttttataaaattctggCAGAGTAAacaTAACATCATGGAAAACGAATCACCAGCTTCTACCACAAGGAAAAAAGGGTTCAATGGACTAAAACAGATGAAAAACGCTGTTAAAATGGTAGAAAGGGGTATATTATCTACATATGCTGCTGCAGCCAGATACAACATCCCAAGAAGAACCCTACGCAACCATCTAGCGAGTGGTTCGACTACACGAAAACTAGGTCGGTCGACTATATTGACTACAGAACAAGAAGCTGTACTTGTCAGAAGAATTATACGTTTGGCTGATGTTGGAGTGCCGATGACTCCAAAGATGTTGCGCGTACAGGCTTTTTCATTctgtaaaattaagaaaattccaAACACTTTCAATGATGCCAAAAATGCCGCGGGGAAGAAATGGTTGAGGTTATTTCTCAAACGACACCCTGAATTACCACCTTCGTCGTAA
- Protein Sequence
- MVAYVLPILQKLLQFNVFAKQAQQVTRAASVLQPEVGNNHGVERTFVFIKFWQSKHNIMENESPASTTRKKGFNGLKQMKNAVKMVERGILSTYAAAARYNIPRRTLRNHLASGSTTRKLGRSTILTTEQEAVLVRRIIRLADVGVPMTPKMLRVQAFSFCKIKKIPNTFNDAKNAAGKKWLRLFLKRHPELPPSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01246820; iTF_00212402;
- 90% Identity
- -
- 80% Identity
- -