Acer067035.1
Basic Information
- Insect
- Abscondita cerata
- Gene Symbol
- -
- Assembly
- GCA_030710515.1
- Location
- JALBCR010002555.1:93990-94442[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.9e-13 1e-10 43.5 0.0 3 44 20 61 18 62 0.92
Sequence Information
- Coding Sequence
- ATGCCAAACAGATACCTTCAGAAAAGAAATACCACGCCAAGGGGATGTTGGAGTGGCGAAAGTTTAAATCTTGCAGTAAATGCTGTAATATCCAATGAACTGGGTGTAAATGAGGCAGCTACAACGTTTGGAATCCcaaaaactacattaaaacgacgactaaaaacaactaattttgagaaacAACAAAGACTAGGCCCTGATTCCATGCTAGGCGAAAATGCTGAAGGAAAACTGgtcaatcacattaaaaaactaCAGCAACATGGTTTTCCACCAACAAGAGAAGAAGTTTGTATAATGGCATACAAACTAGCGAATAAACTAGGCATTCCACATAAATTTAACCATAGTGAAGGAAAGGCTGGTAAAAATGGTTGCAGTCTTTTTTAA
- Protein Sequence
- MPNRYLQKRNTTPRGCWSGESLNLAVNAVISNELGVNEAATTFGIPKTTLKRRLKTTNFEKQQRLGPDSMLGENAEGKLVNHIKKLQQHGFPPTREEVCIMAYKLANKLGIPHKFNHSEGKAGKNGCSLF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00001882;
- 90% Identity
- iTF_00001925; iTF_00001882; iTF_00002064;
- 80% Identity
- -