Acer051673.2
Basic Information
- Insect
- Abscondita cerata
- Gene Symbol
- -
- Assembly
- GCA_030710515.1
- Location
- JALBCR010002165.1:98324-101525[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-08 2.5e-06 29.4 0.0 2 37 16 52 15 54 0.90 2 2 7.6e-05 0.01 17.9 0.0 4 36 367 399 365 401 0.93
Sequence Information
- Coding Sequence
- ATGGTCGGAAAATACAAGAGGAAGACAAATAGACAAAGTTGGAGCAAAGAATCGATGGACCAGGCTATTCGGGCAGTAGAAAACAACGAAATGGGTTGGTTAAAAGCAGCGAAACAATTTGGTGTACCACAAGCTACCTTACGAAGGCGATGCAAAATGCTTTTCAAATTGCGGAAAGTCATAATTTGGACCACcgatttaacaaaagaaaccCGTATGGCAGGCTGGGATTGGCTAACGGGTTTCCGAAAGCGACATCCCGATATAAGTTTGCGAAAACCTGAAGCAACTAGTGCTGCCCGCGCTATGGGTTTCAATCAACCGCGAGTGAAATCATTCTTTGAAATGTATAGCAAAACCATTTctgataaaagattaatttcacCAGAATATACCTCGCTGATGAAAGCGCACTTTCAACAGTTCAAAAACCCCCTAAAGTATTCGCTACTACAGGTAAAAGCAGGAACCATTGGGCTTGTACAAGAAAGGCTGGATGACTGGACCAGTGTTTCTACAATGGTTGCAGCATTTTCAAGGTACGTCAAGCCTAGTACAGACGATAAGGTTCTCCTTATTGTAGATGGTCATGCCAGTCATAAGCATTTGGACGTTCTGGAATTCGCCAAAGCTCATGGTATAGTTCTGCTTATGGGAAGCAGCTACCATAAAAACGGCGACTGGTGGTTTCGAAAAATCGAAACTACAAATCGCCCCATTACCGATGTTGCTCAATCAGAAGAAGGTTTGCCTCAACAAAGTCAAGGAAGGATGGAAAATCTTATGACTCCGGAAAAACACATTTCTGCCATTCATAATCCGATCACTCATTATAGTCCTAAAGCTGATACAACCAATAAAACTTTACCAGCAAACAAACCTAGAAAACTTAGTAGAATATCAGAAATAAGTCCAATTCCTGAAGTATCCTTTGAGAAGAGGAGCAAAGAAAGAATACCCAGGGGAGCCGCTGATATGACCAGCACTCCGTTTCTTAACGAAACCCGAAGAAAAGTTgcagaaaaactagaaaaagaaagGCGTAAaaataaaatgtcattgaaACCCAAACAAAAACGAAAGACGTGGGATAGTAAATCCATGCTTGCAGCTGTTACTGcggttaaaaataaagaaatgggaTACTTGCTAGCTTCAAGAACTTTTAAAGTACCCAAGAGCACGTTGGAAGACtacGAACGTCCACCAGTGTTGCCTAAAGAAATTGAAGCGGATTTGGTTGATTATTGTCTAGAAATGGATAAAGATTTTACGGATTGCGAGCTTCTGATATTCGAAGATTAG
- Protein Sequence
- MVGKYKRKTNRQSWSKESMDQAIRAVENNEMGWLKAAKQFGVPQATLRRRCKMLFKLRKVIIWTTDLTKETRMAGWDWLTGFRKRHPDISLRKPEATSAARAMGFNQPRVKSFFEMYSKTISDKRLISPEYTSLMKAHFQQFKNPLKYSLLQVKAGTIGLVQERLDDWTSVSTMVAAFSRYVKPSTDDKVLLIVDGHASHKHLDVLEFAKAHGIVLLMGSSYHKNGDWWFRKIETTNRPITDVAQSEEGLPQQSQGRMENLMTPEKHISAIHNPITHYSPKADTTNKTLPANKPRKLSRISEISPIPEVSFEKRSKERIPRGAADMTSTPFLNETRRKVAEKLEKERRKNKMSLKPKQKRKTWDSKSMLAAVTAVKNKEMGYLLASRTFKVPKSTLEDYERPPVLPKEIEADLVDYCLEMDKDFTDCELLIFED
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -