Basic Information

Insect: Abrostola triplasia
Gene Symbol: GTF3A
Assembly: GCA_946251925.1
Location: CAMIUJ010000058.1:4449130-4451446[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.5 1.5e+02 3.3 0.4 1 23 10 34 10 34 0.92

2 9 5.9e-05 0.0035 17.9 0.8 1 23 40 65 40 65 0.96

3 9 2.5e-07 1.5e-05 25.3 1.0 1 23 74 97 74 97 0.98

4 9 0.0004 0.023 15.3 4.1 1 23 101 123 101 123 0.97

5 9 0.0045 0.26 11.9 2.5 1 23 129 151 129 151 0.98

6 9 1.1e-05 0.00066 20.1 3.2 1 23 154 177 154 177 0.98

7 9 2.2e-05 0.0013 19.2 4.0 1 23 229 251 229 251 0.98

8 9 8.8e-06 0.00052 20.5 0.9 1 23 260 285 260 285 0.95

9 9 0.0062 0.36 11.5 0.5 1 23 290 312 290 312 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.5	1.5e+02	3.3	0.4	1	23	10	34	10	34	0.92
2	9	5.9e-05	0.0035	17.9	0.8	1	23	40	65	40	65	0.96
3	9	2.5e-07	1.5e-05	25.3	1.0	1	23	74	97	74	97	0.98
4	9	0.0004	0.023	15.3	4.1	1	23	101	123	101	123	0.97
5	9	0.0045	0.26	11.9	2.5	1	23	129	151	129	151	0.98
6	9	1.1e-05	0.00066	20.1	3.2	1	23	154	177	154	177	0.98
7	9	2.2e-05	0.0013	19.2	4.0	1	23	229	251	229	251	0.98
8	9	8.8e-06	0.00052	20.5	0.9	1	23	260	285	260	285	0.95
9	9	0.0062	0.36	11.5	0.5	1	23	290	312	290	312	0.96

Sequence Information

Coding Sequence: ATGGAGGAACATCATCAGAAAAAAGTGTATTATTGCACTTATGAAGGGTGCGCTTCTTATTTCGACAGACCGTATAGGCTTGCACAACATTTTCTAGCTCACAATAATATTAGACCATATCCTTGTAACCAACCAAATTGCTATAAAGCTTATACAAGTAAAAGTCATTTGGATCGGCACATCATTTCTGTGCACATGCCCCATGAAAATGATGTTGTGTATAGTTGCCCACAATGTCTGAAATCATTTGCAAATCGTCAGAATCTCAAGAGGCACTTGAACACTGTACATTTAATTTCATTCCCCTGTAATGTGTGTCATATGCAATTTAAGAAGAAGAACCAACTGAGTACCCACATGTATCAACATACTGGTCTAAAAGCATTCAAGTGTGATCTCTGCTCAGATACATTTATCAGTCTTTATCTAAAGAAGAGACATATGAGATATCACAAAACATATACATGTGATGAATGTAATGTGGTGTTCAACCACTGGTCTAAATATCAAAAGCATAAAAAAACTGATCATGATAAAAATGAGTTACCTCTACATGGTAAAACTTGGCAATCTCTTATTGACAGCAAAGTCACTGTTGTCCAGCCAAAGTCAAACTTTTGGGCTTCAGGTGGAGCTGAGCTTCGGTTGTTGCAGTCACCTTCGGCGTCGCCTCCAGCCGAAGAATACATATGCAATGAGTGCCAGCGAACATTCAAACAAAGAAATCATATAGTAAAACACCTTAAAACACATGGGGTAAAGAAAGATAATAGAACCTTTCCTTGTCCATATGATAATTGTCAAAGGGTTTATTCAAGAAAAAGTAATTTAAAACAACATGTTTTAGTGAAACATATGAAGATGTATCATGAATGTACAGTTTGCAATGCCCAGTTATCAACAAAGGCCAAATTAAATTATCATGTTCAATTACATTACAAAGATGGAGTGATGACACCAAAAATTAATACAGTTCGGAAACCAAGAAAAGATGAAGGCACTTTTAAAACTTCTACTGCACTGAAATTATCTGGTTTGACTGAACCACCAGAAGAAGAAGAAAACTCAACTTCAAATTCTCCTATCAATTTATCTGTTAAAACTGAGTATATTGAAGTTGAAGTTGATATCCATATATAA
Protein Sequence: MEEHHQKKVYYCTYEGCASYFDRPYRLAQHFLAHNNIRPYPCNQPNCYKAYTSKSHLDRHIISVHMPHENDVVYSCPQCLKSFANRQNLKRHLNTVHLISFPCNVCHMQFKKKNQLSTHMYQHTGLKAFKCDLCSDTFISLYLKKRHMRYHKTYTCDECNVVFNHWSKYQKHKKTDHDKNELPLHGKTWQSLIDSKVTVVQPKSNFWASGGAELRLLQSPSASPPAEEYICNECQRTFKQRNHIVKHLKTHGVKKDNRTFPCPYDNCQRVYSRKSNLKQHVLVKHMKMYHECTVCNAQLSTKAKLNYHVQLHYKDGVMTPKINTVRKPRKDEGTFKTSTALKLSGLTEPPEEEENSTSNSPINLSVKTEYIEVEVDIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00000592;
90% Identity: iTF_00000592;
80% Identity: -