Atri003009.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Abrostola triplasia
Gene Symbol
-
Assembly
GCA_946251925.1
Location
CAMIUJ010000010.1:2588675-2595733[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 28 5e-06 0.0003 21.2 2.2 1 23 200 222 200 222 0.98
2 28 0.00032 0.019 15.6 0.4 2 20 250 268 249 270 0.93
3 28 3.2e-05 0.0019 18.7 0.1 2 23 299 321 298 321 0.96
4 28 0.00063 0.037 14.6 1.1 1 23 371 394 371 394 0.97
5 28 0.0034 0.2 12.3 0.5 1 23 414 436 414 436 0.95
6 28 0.0001 0.0059 17.1 1.3 2 23 476 498 475 498 0.94
7 28 0.004 0.23 12.1 4.2 2 23 539 561 539 561 0.97
8 28 0.0021 0.13 13.0 0.6 1 23 611 634 611 634 0.97
9 28 0.017 1 10.1 0.1 1 23 687 709 687 709 0.97
10 28 0.00052 0.031 14.9 4.8 1 23 720 742 720 742 0.98
11 28 0.028 1.7 9.4 1.7 2 23 754 775 753 775 0.96
12 28 0.0028 0.17 12.6 1.4 1 23 785 807 785 807 0.98
13 28 0.0092 0.54 11.0 9.0 1 23 836 858 836 858 0.96
14 28 8.9e-05 0.0053 17.3 2.1 1 23 869 891 869 891 0.99
15 28 1.2e-05 0.00072 20.0 0.6 1 23 899 921 899 921 0.98
16 28 0.00066 0.039 14.6 0.2 2 23 941 963 940 963 0.97
17 28 2.1 1.2e+02 3.5 0.3 1 23 981 1003 981 1003 0.85
18 28 0.099 5.9 7.7 3.7 1 23 1010 1032 1010 1032 0.97
19 28 0.0043 0.26 12.0 1.5 2 23 1043 1065 1042 1065 0.95
20 28 0.0096 0.57 10.9 0.2 2 23 1088 1109 1087 1109 0.95
21 28 3.4 2e+02 2.9 5.6 2 23 1152 1174 1151 1174 0.95
22 28 0.0055 0.33 11.7 0.2 2 23 1190 1211 1189 1211 0.95
23 28 0.014 0.81 10.4 0.8 2 23 1250 1272 1249 1272 0.95
24 28 0.18 10 6.9 3.0 2 23 1289 1307 1289 1307 0.90
25 28 1.4 83 4.1 2.2 2 21 1311 1330 1310 1331 0.94
26 28 0.17 10 6.9 0.5 2 23 1380 1401 1379 1401 0.93
27 28 0.014 0.83 10.4 0.6 2 23 1412 1434 1411 1434 0.96
28 28 1.2 69 4.3 3.1 2 20 1472 1490 1472 1492 0.92

Sequence Information

Coding Sequence
ATGGCCCTCAAGCTTGGAAAATGCAGGCTTTGCCTCAAGCTTGGCGACTTTTACTCCGTATTTACGGTGGACAATGCATTGCAGCTCGCGGAGATGGCAATGGAATGTGCCAGAGTAAAAATATACGAAGGCGATGGGCTGCCAGACAAAGTATGCTCCGAGTGCATACAAAAACTTAGCAGCGCATATATTTTCAAACAGCAGTGTGAAAGAGCTGACCAAGAGTTGCGCCGTAACTATGTACCACCACCAGGATTCAGTATCAGTCCGTCACCACCCACTAGACAAAGCAGTGATTCAGCGTTTTCTAATCATACCGACATCTCCAAACCGACGACGTCTTCCATTGAAGAGAAAGAATCCCCCATAAATAGAAATAGGAAACGTAGTATCGACAGTGCCGACAATGGATCGACCGGCGGCGCATCTAGTGACTATAGGCCCAGCGGCTCTAAACGCGTAGAGGAACTACGAAGGTCCCAGAAGAGACCTAGAATGCAGTCTGGCAACACCTCTCAGTTAGACTCAGATTACGAAGACCACAGCGCCTCGTACTTAGCTGAAACAGATTCCGATGAGCCCTTAATTAAAAACAATTTCAGTTGCAAACGTTGCCCCAGAAAATTTGTTTCTAAACGGAGTCTTGCTAATCACATGAGAACACATGAAAAGGAAGATGTTGCCGCGAACGTCGAAGTTGAAGTGCCCGGGATGTCTGAGGACGCCACGGACATGGATGACAAGCTGAGCTGCAACAAATGTGGGAAAACGTTCAAGTTGAAGATCATGCTGAACCGCCACTATGATGTGTGCGGCAAGACACCCGTTAAGTCGCCACAGAAAGAGTTGCTGGTGTCCTTACAACCTATTGATGGCATGAAGAACCGGAATATTGTCTGCGAAATGTGCTCTGCCAAGTTCAAGACGGTAGATAATTTAGAAAAGCATATGCGTGTGGTACATGCCGCCGTCTTGAAGAAAGAACAGTATCAGAAAAGGGAGAACGGTAAGGTAGCGGTGCCATGCCTCTATTGCCACGAGTTGTTTGACGATTATTACGTCCACAGTGCGCATTTCAGTAAGTGTCCGAACAAAGACGATTCTATGCCGTACGAGTGCCCTGTATGTAAGAAGGTGGCGACGAGGAAGACTTCATATTTCCAGCATCTGAAGAACATGCACTTTGAGCCTCGTTTGTCGTACGCTAATACTTCGCTGGAGCCGGAGTCTCAGGATTATCACGAATGTAAAATCTGCTTTAAAAAGCTCGCGACACAGGACCTGTTGATCACGCATTTAGCTGCTCATATGTCGCATATAGAAGACAATGATGGCGGCGCTGACAATGAGTCCAGAGCAAGCACCATTGATGATTCAGTGTCAATCAAATCAGTGCAAAGTAACTCTAACACTAATAACATGCTCAAATGTCAGATATGTGACAAAGAGTTCAAATACAAGAAAGCACTTCAGACTCACGAACTACGATATCATTCTGAGGTCCCAGTGGAAGTGAAGACGGAGCCGCCCGATAAAGCCTCCACGAGTTTGTTGAGCGAGACTTCGATCTACCGTCAGTCGGAGTCCGAGTCCAGTCAAGAAGAGGACGATAATACGTGCGATATATGCGAAAAGCAGTTCTCGTACCGACGCCTCTTGCTTCACCATAAGAAAACGAAACACAACATGAGTTCGGGCCACAAGCGCGCCAAAATCTACCTCAAAAACTGCTCAGTCCGCTGCCTGATTTGTGATGTAGAGATGAAAGTCGGGGCCATCAACGAGCACAATCAAAAGCATATATCTAAGGGTATGAAGCCCCGGAATTTATATACGTGCGCGGAATGCGAGGATACGTTTAAGAGTTGTTCTGCGCTCGCAAACCATATAAAGTTGATACATAGGTTGAAGCAGAAGAAGTTAGAGTACGGGGCTGACCCCTCGGATTTTTGTGAAGTCGTTGTGGCAAAAGCGGAACCCCTGGACTGGATCCAGAGTCACAACGACTTTGGAGAGGTTCCAGGCACAGAGACGAAGCCGCTGGTTGACCTCAGCGGGTTCACATGCCCCATCTGTGCCAAGAAAATGCCGACGCTCATATCTCTGAAGCGACACGTTAACTGGCATTCTAATGTCGGTAATAATATAGAGAAGAAGTATGAGTGTGCCGTCTGCAATGAGTCATTTAGATTCCAATGCCACTACAAGATCCACATGCGCGAACATTACCACGACACGAATCTGGATCCCAAGCACCTGACCTGCACCATCTGTGGGCGCAAGAGCAAGCACCTCCGCGCGGCGCAGATGCACATGAACTACCACAAGCAAACCCGCTTCCAGAACAAAGACTACCAGTGCTCCATCTGCGAGCGAGTGTTCCAGCACAGGAAAGTATACCTCTCCCATATGGCCATTCATTATAAGAAAGGAGACAGTGCCCAAAACACCATAGTAGGTCACGTGCTACCCGCCACAGCTGACAAAACAGTGTTCGACGGCACCCACACCTGCCACCATTGCGGCAAGGTCTGCGACTCCGAGACCTCCCTTAAGCATCACCTGATCTGGCACACGTCCAAGACCTTCCTGTACGGCGCCCGGTATGAGTGCAGCATCTGTAAAATTAAGTTCACGAACAAAAGAAGACTTGAGCTCCACACCAGAACCCACTATGAAGACGATAATGGCCCCTATAAGTGCACTATTTGCGGTAAAGGGTACACCGACGAAGGCTACTACCAAAAACACCTCAAAGGTCACAACTTTGACCATCAGTCACACAAAAAGAGAATAGAAAATATCAGGAAGGACAAAGTCAAGTGTCCAATATGTAGTAGGTATTACCCAGATCTAGTGAAACTTATTCGTCACCTAAGGCGGACGCATCCCGAAAGTAAGATGATCAAAAACGATCCCGACGCGCCGCCGCAACCTTACTACTCCTGCAAATTGTGCGCCAAAGTGTTCCTCGATGAACGAAGGTTACAGTACCATGAAGAGGCTCATCTAAGAAAGCCAGAATTTTTCAAATGCAAGTTCTGTGGAAAGAAAACTATATCTCTAAAGAACCACAGAGTCCACATAAAAGGCCATTTAACACAGAAGCACTTTGATAACCCTCTGAAATGTCCTCACTGTGAGGAGACGTTCGTGAAGGGCTATGACCTGCACTATCACCTGCGCGACGCACACGACATCAACGAGACCTGGATTGCTGAACGCTCGGAGAAGACCCTCAACGGACCACTAAAAGACCTACAGTGCTCCATATGTATGAAAGTTCTAGCAAGCAAAGGAAACTTCGAGCGACACATTGATTACCACAACTCATTGAGATGTAACTACTGCTTCGACTACTTCAGCTCTCTCAGGTTCCTGGAGGGACATCTAGCATTCTCGTGTGAAAAGAAAAAGCTTCTAGGCGACACAGAAGTCTACCCTAGAAAAGTGAAATGCCACATTTGTTACAAAGCATTCCATGTTCAAGTCAAACTAGACTGTCATTTGCGCACGCAACACGCCATCAAAGTGGATAGGGAAGCCTCTGCTGGGAAGAAGGAAATCGTCTGCGATTATTGCTTTAGGGTATTTGAGAACGAGTATGCCTTGTCTACTCACAAAATTTACCATCGTACCGTTGGCTACTATGGATGCATATACTGTAGTAAGAAGTTTAACACAATGACGGTTTATCGAAAACATAAGAATCACCATTTCTCACAGCTTAATGTGGATAACCCGACCAAATGCGAACATTGTGACGAGACGTTCGTCGCGTTTAGGGAAATGATATACCATATGAGGGATGTGCACGGAGACGACAAGGAATGGATAACGTATCCGAAGGAGTCTATCGAGGAAACTTGTCCAATTTGTAACAAAATGTTCTACAACCTGCACAAACACCTGACTTACCACGAAGAGAACAAGTGCAAGAAGTGCAGTGAATACTTCTTCTCCAGAGCAGACTTTGATAATCATCTCTGCGCCATCGAGAGCGACGACGAAGGCGCTACATATGTAGGTAACGAAGACGCACCTAAGTATGAAGAGTGCAGGTTTTGCTTCAAACCTATCACTAAGAAGAGTTCCAAGGCTAAGCATGATCACATTCACAAGGGATCCGGCTCTATATCCTGCAGATTCTGCCCACTTAAGTTTAAAACTATGGACGCCTTCAATATACACGCATTCTCCCACCGAAGCAGAAAATACAATAAGAAACCCATCAAATGTCGGAAATGCAGTGAGAAGTTTGTAAAATACGGACCGTTTATAAAGCACATGAAAATAGTTCATAAATCTTTGAAGAAACTGCATTACCGGGCCGTTGTGAAGCCGGAGAAGTGCGTTGTATGTGGAGATGAGTTCCCCAACCTTCACAACCATTATCGAGCTCATCTGTTGAACCAATGCCAGGCTTGCAACAAATACTTCACTTCTTATAAGTTATTCTCTAGGCACGAATGTAACACAGAAGACTCGGACCCATCTAAAGTGTTTACATGCGACGCAAACTTGAACGAATTGATAAACACATACGTTCCTAAGGACGAGAAGGATGATGAGAAATACTATGGCCACAGTGACGACGAGGAAGAAGACTATGTCGATCCACAGGTGTTTTTGGACGAAGAAGAGAGTCAGGAGAGTAAAGACATACCGATGATCCAGTCGCCCATCATATCCGATGTCCTGTCGCTTTACAAGGCGGAGGCTAACGGCATTGATGATAATATAGTCAATATTACTGACGATGACTCCGTAGATATAGACCACTCTCTCCCAGTTGTCATTATTGTTGATGATTAG
Protein Sequence
MALKLGKCRLCLKLGDFYSVFTVDNALQLAEMAMECARVKIYEGDGLPDKVCSECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPSPPTRQSSDSAFSNHTDISKPTTSSIEEKESPINRNRKRSIDSADNGSTGGASSDYRPSGSKRVEELRRSQKRPRMQSGNTSQLDSDYEDHSASYLAETDSDEPLIKNNFSCKRCPRKFVSKRSLANHMRTHEKEDVAANVEVEVPGMSEDATDMDDKLSCNKCGKTFKLKIMLNRHYDVCGKTPVKSPQKELLVSLQPIDGMKNRNIVCEMCSAKFKTVDNLEKHMRVVHAAVLKKEQYQKRENGKVAVPCLYCHELFDDYYVHSAHFSKCPNKDDSMPYECPVCKKVATRKTSYFQHLKNMHFEPRLSYANTSLEPESQDYHECKICFKKLATQDLLITHLAAHMSHIEDNDGGADNESRASTIDDSVSIKSVQSNSNTNNMLKCQICDKEFKYKKALQTHELRYHSEVPVEVKTEPPDKASTSLLSETSIYRQSESESSQEEDDNTCDICEKQFSYRRLLLHHKKTKHNMSSGHKRAKIYLKNCSVRCLICDVEMKVGAINEHNQKHISKGMKPRNLYTCAECEDTFKSCSALANHIKLIHRLKQKKLEYGADPSDFCEVVVAKAEPLDWIQSHNDFGEVPGTETKPLVDLSGFTCPICAKKMPTLISLKRHVNWHSNVGNNIEKKYECAVCNESFRFQCHYKIHMREHYHDTNLDPKHLTCTICGRKSKHLRAAQMHMNYHKQTRFQNKDYQCSICERVFQHRKVYLSHMAIHYKKGDSAQNTIVGHVLPATADKTVFDGTHTCHHCGKVCDSETSLKHHLIWHTSKTFLYGARYECSICKIKFTNKRRLELHTRTHYEDDNGPYKCTICGKGYTDEGYYQKHLKGHNFDHQSHKKRIENIRKDKVKCPICSRYYPDLVKLIRHLRRTHPESKMIKNDPDAPPQPYYSCKLCAKVFLDERRLQYHEEAHLRKPEFFKCKFCGKKTISLKNHRVHIKGHLTQKHFDNPLKCPHCEETFVKGYDLHYHLRDAHDINETWIAERSEKTLNGPLKDLQCSICMKVLASKGNFERHIDYHNSLRCNYCFDYFSSLRFLEGHLAFSCEKKKLLGDTEVYPRKVKCHICYKAFHVQVKLDCHLRTQHAIKVDREASAGKKEIVCDYCFRVFENEYALSTHKIYHRTVGYYGCIYCSKKFNTMTVYRKHKNHHFSQLNVDNPTKCEHCDETFVAFREMIYHMRDVHGDDKEWITYPKESIEETCPICNKMFYNLHKHLTYHEENKCKKCSEYFFSRADFDNHLCAIESDDEGATYVGNEDAPKYEECRFCFKPITKKSSKAKHDHIHKGSGSISCRFCPLKFKTMDAFNIHAFSHRSRKYNKKPIKCRKCSEKFVKYGPFIKHMKIVHKSLKKLHYRAVVKPEKCVVCGDEFPNLHNHYRAHLLNQCQACNKYFTSYKLFSRHECNTEDSDPSKVFTCDANLNELINTYVPKDEKDDEKYYGHSDDEEEDYVDPQVFLDEEESQESKDIPMIQSPIISDVLSLYKAEANGIDDNIVNITDDDSVDIDHSLPVVIIVDD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00785388;
90% Identity
iTF_00000539;
80% Identity
-