Basic Information

Insect: Abrostola tripartita
Gene Symbol: Zfa
Assembly: GCA_905340225.1
Location: HG996511.1:1302664-1314354[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0011 0.079 13.8 1.9 1 23 244 266 244 266 0.99

2 10 0.0083 0.61 11.0 1.3 1 23 273 295 273 295 0.97

3 10 2.1e-06 0.00015 22.3 6.4 1 23 328 351 328 351 0.95

4 10 2.8e-05 0.0021 18.7 0.1 2 23 358 380 357 380 0.94

5 10 2e-05 0.0015 19.2 0.1 1 23 393 415 393 415 0.97

6 10 0.0013 0.093 13.5 0.2 1 22 421 442 421 446 0.93

7 10 0.00011 0.0084 16.8 1.7 2 23 455 477 454 477 0.95

8 10 6.6e-05 0.0049 17.6 0.2 1 23 483 506 483 506 0.97

9 10 2e-06 0.00014 22.4 1.0 1 23 515 537 515 537 0.99

10 10 0.027 2 9.4 0.3 1 19 543 561 543 566 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0011	0.079	13.8	1.9	1	23	244	266	244	266	0.99
2	10	0.0083	0.61	11.0	1.3	1	23	273	295	273	295	0.97
3	10	2.1e-06	0.00015	22.3	6.4	1	23	328	351	328	351	0.95
4	10	2.8e-05	0.0021	18.7	0.1	2	23	358	380	357	380	0.94
5	10	2e-05	0.0015	19.2	0.1	1	23	393	415	393	415	0.97
6	10	0.0013	0.093	13.5	0.2	1	22	421	442	421	446	0.93
7	10	0.00011	0.0084	16.8	1.7	2	23	455	477	454	477	0.95
8	10	6.6e-05	0.0049	17.6	0.2	1	23	483	506	483	506	0.97
9	10	2e-06	0.00014	22.4	1.0	1	23	515	537	515	537	0.99
10	10	0.027	2	9.4	0.3	1	19	543	561	543	566	0.92

Sequence Information

Coding Sequence: ATGGGTGAGAGATGCAAAAGAAATCCAATTAATAAGGACGAGAAACCAGAATGGTCGAACATCTTTTGTTTTGGATGTCTATGTCATGGTAAAGATAAAAATGTACACAATTACACATTCCAATGCGGGCCTCTGAAGGAAATATTCCAGATGGACGGCATATCCCTATGTTATTTATGTAAAAGAATGGCACAACACACTGAAATGTTCATACAGAATGTGCATAGTAATCACATATTACTGGAAAACTTTCAAAATGTAATGGATGAAACATTAAAATCAGTGAGATCTCAGACACAGCCACTAGTCAACCTATCTCAGGTGCCATTATACGCGATAGAGTTATCAGAGACTGATGGCCAGAGTTTTGAGGAGTCCTTCTCTGTCATATGCTCTAAAAACACGAAGAAAGACGTTGAGATTAAGGTGGAGATGAAGGAAGAAGAACTATATGATGATGTGTTAGAAGGAGAGTTTATCAATGGTGATGATGAAGACGAGTTTCCTCTGAAAGCGATTCTGAAAGAAGAATTAGTTCTAGAAGACATTGACAGCATAGACCTCATGAGCCTCAGTGCTACCCTGAAGAAGAATAAATTAAAGAAGAAACATAAAATTAAGAAAGAAGGTTCTATGCTGCTAAAAGTGAAAATGATATATTTGACAAAGGAGCAGTGTATCGAGGAGCGGGCTCGGTCAGCTCAGGACAAGAAGTACCTCGGCTGTGCCTACAAGTGTGAGAGCTGCTTGAAAGGTTTCACCTTCAAAGGCAGCTACGATAAACATATGGAGAGACATAACCAGTGTATGGGTGATCACGAATGCGACATTTGCAAGCAGAGAATGGATACGGAAGATAAACTTGTCAGTCATATGAGGTATCATTTAGTCCGGTACAAATGTGTTGAGTGTGGATTGACACGGAATTGTCGGATAACAATCAAGGACCACTACTTTGCGTACCACTGTCAAGGATACAGTCACAAATGCCCGCAATGCCCGAAGACTTTCACACGTCAGACTTCTCTCCGTAAGCACATGCACTACACGCACACACACAAGGAGCGCGTGCAGTGCGCGTACTGCGACAAAGTGTATGCCAACAAGGTTGCACTGCGGTCTCATATGATTGGGAAGCATGCGAAAGAAGTGTCTGCCGGCGAGGTGAGCAAGAAGTATGTGTGCCAGGAGTGCGGGATGGCCTTCAAGGCGCCTTCTCAGCTCAGGAACCACGGCATCAAGCACTCCGACAGCCGGGAGTACTACTGCGTCGAGTGCGACAAAAGTTTTAAATCGGACGCCATTTTGAAAAACCATTTGAAGACTGCAGCAATCCACGTCAATTATTTAGAATTACCTTTACCGTGTCTTCACTGCGACAAACGTTTCTCAATTCGCCGGGATCTGGAGAGACATACAAACAGAGTGCATCTAAATATTAAGCCGTATACATGTGATCGGTGCGAAAAGGCATACGTAAACTCGTGGGGGTTAAAAGACCACCAGCGGTTAGTCCACGAGGGATACAAACGACCCCTGCAGTACCCCTGTCCTATGTGTGATAAAGTTTTTGATCGGAACCATATATTAAAAAGTCACATAAGGACGCATACAGGAGAACGCCCATTCCAATGTAGCAAGTGTCCAGCCCAGTTCAGCCAGGCTAGCATACTGAGGACCCATGATAAGCTGATACACCTCAAACTGACGAGAGATGGGCGACCCAAAGTGAAATAA
Protein Sequence: MGERCKRNPINKDEKPEWSNIFCFGCLCHGKDKNVHNYTFQCGPLKEIFQMDGISLCYLCKRMAQHTEMFIQNVHSNHILLENFQNVMDETLKSVRSQTQPLVNLSQVPLYAIELSETDGQSFEESFSVICSKNTKKDVEIKVEMKEEELYDDVLEGEFINGDDEDEFPLKAILKEELVLEDIDSIDLMSLSATLKKNKLKKKHKIKKEGSMLLKVKMIYLTKEQCIEERARSAQDKKYLGCAYKCESCLKGFTFKGSYDKHMERHNQCMGDHECDICKQRMDTEDKLVSHMRYHLVRYKCVECGLTRNCRITIKDHYFAYHCQGYSHKCPQCPKTFTRQTSLRKHMHYTHTHKERVQCAYCDKVYANKVALRSHMIGKHAKEVSAGEVSKKYVCQECGMAFKAPSQLRNHGIKHSDSREYYCVECDKSFKSDAILKNHLKTAAIHVNYLELPLPCLHCDKRFSIRRDLERHTNRVHLNIKPYTCDRCEKAYVNSWGLKDHQRLVHEGYKRPLQYPCPMCDKVFDRNHILKSHIRTHTGERPFQCSKCPAQFSQASILRTHDKLIHLKLTRDGRPKVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00001381;
90% Identity: iTF_00001381;
80% Identity: -