Basic Information

Insect: Abrostola tripartita
Gene Symbol: -
Assembly: GCA_905340225.1
Location: HG996516.1:1617466-1619796[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0023 1.6 9.1 0.6 18 43 9 31 5 32 0.93

2 16 7.5 5.2e+03 -2.1 0.1 19 43 38 59 35 60 0.61

3 16 0.0042 3 8.3 0.3 18 43 68 90 65 92 0.75

4 16 5.9e-05 0.041 14.2 3.2 11 43 94 121 90 122 0.86

5 16 0.0016 1.1 9.6 0.3 18 44 129 152 127 152 0.94

6 16 0.00024 0.17 12.3 2.1 15 43 155 180 153 181 0.92

7 16 0.0047 3.3 8.1 0.5 17 44 186 210 182 210 0.89

8 16 0.0034 2.4 8.6 0.3 17 44 217 241 211 241 0.87

9 16 5.9 4.1e+03 -1.8 0.2 19 26 254 261 252 276 0.66

10 16 0.046 32 5.0 0.3 3 27 345 369 343 383 0.83

11 16 0.037 26 5.2 6.1 5 39 421 452 416 458 0.69

12 16 0.0055 3.9 7.9 2.9 16 43 461 485 450 486 0.81

13 16 0.084 59 4.1 0.8 17 44 491 515 487 515 0.85

14 16 0.69 4.8e+02 1.2 1.0 18 28 522 532 518 545 0.82

15 16 2.9 2e+03 -0.8 0.1 19 43 553 574 549 575 0.71

16 16 9.7e-05 0.068 13.5 2.4 6 44 604 641 602 641 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0023	1.6	9.1	0.6	18	43	9	31	5	32	0.93
2	16	7.5	5.2e+03	-2.1	0.1	19	43	38	59	35	60	0.61
3	16	0.0042	3	8.3	0.3	18	43	68	90	65	92	0.75
4	16	5.9e-05	0.041	14.2	3.2	11	43	94	121	90	122	0.86
5	16	0.0016	1.1	9.6	0.3	18	44	129	152	127	152	0.94
6	16	0.00024	0.17	12.3	2.1	15	43	155	180	153	181	0.92
7	16	0.0047	3.3	8.1	0.5	17	44	186	210	182	210	0.89
8	16	0.0034	2.4	8.6	0.3	17	44	217	241	211	241	0.87
9	16	5.9	4.1e+03	-1.8	0.2	19	26	254	261	252	276	0.66
10	16	0.046	32	5.0	0.3	3	27	345	369	343	383	0.83
11	16	0.037	26	5.2	6.1	5	39	421	452	416	458	0.69
12	16	0.0055	3.9	7.9	2.9	16	43	461	485	450	486	0.81
13	16	0.084	59	4.1	0.8	17	44	491	515	487	515	0.85
14	16	0.69	4.8e+02	1.2	1.0	18	28	522	532	518	545	0.82
15	16	2.9	2e+03	-0.8	0.1	19	43	553	574	549	575	0.71
16	16	9.7e-05	0.068	13.5	2.4	6	44	604	641	602	641	0.80

Sequence Information

Coding Sequence: ATGTATCTAAACCAGTTAGACTTTGTGTGCGACTACTGCTCAAGAACATTCACGAGGAAGTACAACCTTCAAACTCATATAGAGAACTGTCACGTGAACTCCTCAAGCCACTGCGATGTCTGCGGCCAAACCTTCGGCAGTCCAGCCGGAGTGCAGCAGCATTTATCCAGAGGCCATAACAGTTACGGCCAGTCCCTGCCCGAGTGCGATATCTGCGGCCGAATCTTTACAAGGAAACAGAACATCACCGCGCACATGCTGTCCGTACACTTACAGGTACCCAATTATTCTGTTCACTGTAAGATTTGTGACAAAAAGTTCTCGTCCGTAAAGAATTTGAAGAGACATGTAAATTTACTACACAACCCTGATGTTGAGTATCCGACTTGTAATGATTGTAACAAAGTTTTTAAGAGTAAGCAGTCCCTTATAACACATATACAGCAGGCTCATAAACTGGCGACGGTCATTAAGTGTCACTTATGTGAGCGAGTGTACACGAACAACAGGAACTTGAAGCGGCATATTGAGATGTTTCATGGTGAGAAAAGTGAGTTCCGATGCGATATATGTCCCAAAGTGTACACCTCAAATCAGAGTTTGCGACGCCATGCCCGAACAAGACACAGTACGGAAAACCACGAGCAGTTCTCATGCAATTTTTGTATGAAACTTATCGTTGGAAGGGAAAACTTTGAGTCTCACGTACAGTCTTACCACCAAGAAGTGGATTCGGAGGTAAAAACAGCGGAATTCTTCTGCGAATATTGCGATAAGTGCTTCGAAGATGAACCGTTTTTGCGCCAGCATGTGAAGGCAGAGCATTCGTTTAAGACGTTCTATAAGTACTGCAAGAAATACCTGATCAAGCAATACCGTATGGATATGAAGCAGATTTACCACTGCGAGTTTTGCAGCACTCCGTTCCCAACAGTCTATGAATTGAAGGACCATATGAAGATAAATCACGACACAGAGTATTCTTTATCGACTTGTAATGTTTGCTTCAACAAATTCTACAGCAAAGAAGCAATGTGGTCACACAAACAAGTCTGCATACCACCCCGGAACGTAAACTCTTGCAGTCATTGCGATAAATTGTTTACTGATGTTTCTAGCTTAGAATTCCACACGCGAATTTTTCATCCACAAGCTCAAATTGCTGATTCTAATATAACATCCACGAATATAGATGATGAAACGCTCGCGTTCAAATGTGAGAGGTGTGACAGGCTGTATTACAGCGATAGGTCACTGAAACACCATATAAAGTTGAAGCATACGACAGACGAGGCGGTAGAGTGCGAAATTTGCGGCAAAATCTGCAGCAATAAGTATTATTTAGCTTCCCATATTAAGATGGTCCATAATACGGACTCATGGTCGCAATGCGAGTACTGCGATAAACAGTTTAAGTCTAAAAGGAATATCCGCAGGCATATTGAGTATACACATTTAGGTATGCAACGCTACAAATGTATTGAATGCGAGACTTTGTTTAAAGAGAAAAGGAGTCTTCGAAAGCATGTGAGGACGAAGCATCCAAACTCGACAGCTTTCCCCCAATGCCATATATGTCATAAACGATTTGAGTCAGCCAAGTCATGCAAAATCCACTTAAAATTGCTCCACTCCTTCAATATGAACACGTTTCCGTGCGACTTATGTTCGGTATCGTTCAGCTCCAACGAAGCGCTCACTATACACTTAGAAACAAAACACTTAGCTGAAGATGAGATTTACAAATGTGAGGAGTGCAATCTCGTTTTTAAGGGCCAGGAGAAGTTTGATAGCCACAACGAAGTCTGCCACGTGAATTTGGTCCCTAATATCAAGCAGAAGGTGCTACCTCGATGTATATTATGCATGAAAGATTTTAGCACGCGAAAAACCTTGAAACGGCATATCAAGAAGTTCCATCAAGATTTTGACGTCGACGATTTGGCGACGTTCGGATCGCGACACAGAAATTTCGCAGTCGATTGTGACGAATGTATTAGGAACATCAATGACGAATTCTACTTTAATATTTACCAGAAACTGAAACACTTGAGGGACTCTATAATTTTTAAGTGCGAATCTTGCTTGAGTTCCTACAACTCGCTGGAATACGCTATTCAGAGGTACAAAGTGTGTAATGTCGATGCTTATAAGAGTAAGATGATTTTGAGTGAGCTTTGTACGGCGGAGATGAGCGAGGAAGAGGCTGACTTCTCAGGATTCGGCGCGTTACATGACATGCTGCCTGAGAGCACGACCAATGATATCAAACTAGAGCTGTTTGATGAGGCCTTAGAGTCTGATATCAAAATGGAGCCTCCTTCGCCGTGA
Protein Sequence: MYLNQLDFVCDYCSRTFTRKYNLQTHIENCHVNSSSHCDVCGQTFGSPAGVQQHLSRGHNSYGQSLPECDICGRIFTRKQNITAHMLSVHLQVPNYSVHCKICDKKFSSVKNLKRHVNLLHNPDVEYPTCNDCNKVFKSKQSLITHIQQAHKLATVIKCHLCERVYTNNRNLKRHIEMFHGEKSEFRCDICPKVYTSNQSLRRHARTRHSTENHEQFSCNFCMKLIVGRENFESHVQSYHQEVDSEVKTAEFFCEYCDKCFEDEPFLRQHVKAEHSFKTFYKYCKKYLIKQYRMDMKQIYHCEFCSTPFPTVYELKDHMKINHDTEYSLSTCNVCFNKFYSKEAMWSHKQVCIPPRNVNSCSHCDKLFTDVSSLEFHTRIFHPQAQIADSNITSTNIDDETLAFKCERCDRLYYSDRSLKHHIKLKHTTDEAVECEICGKICSNKYYLASHIKMVHNTDSWSQCEYCDKQFKSKRNIRRHIEYTHLGMQRYKCIECETLFKEKRSLRKHVRTKHPNSTAFPQCHICHKRFESAKSCKIHLKLLHSFNMNTFPCDLCSVSFSSNEALTIHLETKHLAEDEIYKCEECNLVFKGQEKFDSHNEVCHVNLVPNIKQKVLPRCILCMKDFSTRKTLKRHIKKFHQDFDVDDLATFGSRHRNFAVDCDECIRNINDEFYFNIYQKLKHLRDSIIFKCESCLSSYNSLEYAIQRYKVCNVDAYKSKMILSELCTAEMSEEEADFSGFGALHDMLPESTTNDIKLELFDEALESDIKMEPPSP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00000536;
90% Identity: iTF_00000536;
80% Identity: iTF_00000536;