Basic Information

Gene Symbol
-
Assembly
GCA_905340225.1
Location
HG996511.1:5274369-5278674[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.28 3.7e+02 1.7 0.1 2 13 68 79 67 85 0.86
2 7 0.0023 3.1 8.3 0.0 21 45 331 356 319 357 0.87
3 7 0.0024 3.2 8.3 0.1 22 43 434 454 413 457 0.84
4 7 0.0068 9 6.8 0.2 22 46 576 605 559 605 0.74
5 7 0.0001 0.13 12.7 0.1 3 45 656 707 654 708 0.83
6 7 0.002 2.7 8.5 0.2 13 42 833 869 818 873 0.80
7 7 0.015 19 5.7 0.2 3 15 1028 1040 1026 1087 0.82

Sequence Information

Coding Sequence
ATGGAGCCAATAGTAGTGAAGACAGAAGTGCAGAGCAATGGAGAAATATTGCTGTTCTATGTTGATGAAAATGGAGGAAATGAAGAAGGAGTTTTGACAACTGTTGAAAGCATAGAAAACCATGCAATTCAACTACAACAGGACAGCTCCTTCATTCTTCCAGACATGGAAAGTGACACTGACATTAATTTAGACCTTGAAGAAAATTGGTCTGAAGATGAAACAAAAAGACTTCTTGTATTCTACAATGATAACAAGCAGACGTTTATAACTGGAACTACTAAGAAGAAGCATCTCTGGACAGTTGCATGCAAAACTATGCTTGTCGGCAAGAACCCTTCTTCGTGTGAAGTGAAACTGGTCAGTTTGAGGTCGAAATACTTTGAAATTTGTGGCCACATACAAAAAGGGGTCTATGTTAAATGGCCATACTTTGAGCTGTGCCATCAAATATTTCATGATGAAACTGAGGTTGTAGAAGCGACACAAGTTATGAAAGTACCAGCTTTACAGGAAAATTATGACAATGTCATGGTGGTGAAGAAAGTTAATAGTCGCTCAACTGCTGATGAAAAAGTTGAAATCATGCTCAACTTGTATCTAAAGTACAAAAAGAACTTCCAACAAGAATACTGGAGGCGGGGGTTATGGGAGACTATTGCTTTGGAGGTAGGAGAAGAGGACGGAGAATACTGGCAAAAACGGTTCCTGAACTACAAGCAGCATTACCTAAGGTTGTTAGAGAAAAGAAGACAGACTGGCCCACATGGCATTAACTGGCCATACATGGAATTATTTGATAAAATATTTGAAGGTGATGAAGAATTTCAAAGAAAATATTTGAATGAGAATTTTGAAGCCATTAAAAATGAGGTTATAGTCGAGCCACAAGCATTGTATAATGTTGATGATTGGAATACAACAGAAACTACTGTTTTAGTCAAATACTGCTTTGATTGCTTTGATGAATTTGAGGACCGAACTATCCCAAATAATTTCCTATGGAACGAAATTGGTCGGCTATTAGATAAAACACCAGATGCTTGCAAAGAAAAGTATATAGAACTCAAGAGTGCACATCTTGACAAATATATCGAAGGTGGCTATAGTCTACGAGACCGGAAACCTATCGCAATTCTATTCGACAATATTATATCCAAAGAAATAGATAATCAAATTGCTAAGACTAGCAACAAGCCTGAACAATTAGAATTATGGAAGACAGAGGTGTTGGATGACCTTGTACAATTTTTCTATGATAACATAGAAATGTATAAGGACCTTTTATGCCATTTTGTGTGTTGGGCAGCTGTTACAAAGAAGTTAAATAAGAGTCTTCAAAGCTGCAGAAGTCAATGGGAGGATCTTGTGGCACTATACAAGACTATTTTGAATGATAAGAAGGAGAATCCTGATATGCAGATCGACTGGCGGTACATTGACGTGTTCGATAGGATATTTGATTACGGCATGGATGCTAATTTGCTAGCTGGCTACGAGACTATGAATGGGAATGGACAAAATCAGAAAATTGGGGCTAGTGGGAAGATTGGTGTAAAAAAACTAAACATAAAACTGGACGGGTCTACTGAGGATTTTACTGATGATGAGGAGTCTTTCGACGAACGAGGTTTCACGAAACGCACTAAGCGACGCTCGGGTGATTCCAAAGCTTTCAAAATACTAGAATATTACCAGAAAAATAAAGACAAATTCTCCACAACAAACAGAAATAAACATTCACTATGGGAAGTGCTGTCGAAACAGATTGGCATTTCAGCCACACAGTGTGCTCACAGATTCAGAAACTTGAAGCAAGTATACACAGCTTACGTCCAAAGAGAAATCAATAAACCAGAAATGCCGATCCTCTGGCCATACTACGCTCTATGTAAAAAAGTATTTGGCTACCGGGCGATCAAATCGAAACTTAAACATGGAAAATTAGATTCAGATGACAGTGAAGACTGGTCAGCAAAGGAAATCAAACAATTGATCAACTATTTCGCGCAGAATTTCGATGATATCAACAGTAATGTGGATGATAACTCAAAATGGTCAGATTTGGCTGGCGAAATAAGTAAAAGTGAGACATCTTGTAAAGAGAAGTTTCTTGAACTGAGAAAGTCTTATAGGAAGTTGAAAACTATGAGGAGTAGGAATCCTGATGTGAAGATATCTTGGAAGTATTTTAACATGTTTGAACAGATCTACAGTGTCAACGAGGACGGTCAGGAGGCCATGCAAGTGGATGATGAGCAGAATGCATACCTAACTATTGGCTCCGATACGAAGATTGAACAAGAAGAAGATGACTTCCAATGCATCATAGTTATACCAGAAGGGCAAGATATATCTCAGATAGAGTCAGCACAGATCATAATACAAGGCCCAGAACAACTTCAAGAACCTGTTGAAAACACAGCAACAGACGTGAAGCAAAAACCGCTCGTTAAATGGACGAAACGGACCAAGAAGAGGCTTCTTATCTTTTACATCAACTACATACGATCACATAAAGGAAAAGAAATCAAAGCAAAAGATATGTGGGCAGAAATTGCCACGAAATTAACTGACAAGTCACCGCTGTCCTGCAGAAAGATGTTCGCAAAGTTAAAGGCCAATCACAAACAAATAGATGAACTTGACCCCAACATGAAGAAAACTCCATACTACACCCTTATGGAGAAAGTAATGCGTTTAAAACCTAAGTTCACTAAAACTGAAAAAAATAAAGCATTGAAAGACGGAAAAATATACAAAGATGTAGCTTTACCCGATAACAAGGTAGAGCAAGCATTACAATACTACTTAGAAAACATTGAAGACTTCGTCAGTCCGAGATTTGAGAAGAAATACTTGTGGACCGAACTTGCTAATTACGTTTGCGAGCCAATAACTAAAGTCTTCAACAAAATAAACTATTTAAAACAATCTTATAATATTAATACCGACGAAATCTCCGGCGAGAAGACGCCGTTTAGTGATCTTCTGAAGAGTATTATAACTAGAGAAGAAGCTGTAAAACTTATTCTTGAGAATACTCCAAAACCAGTTGTAGAAGACTCAGGGATCGAGGAAACCTGGACTGATGAGGAGACAGAACAGCTTCTAGAATGGTATCTTAGTAATTTGGAGAAGTTCAAAAACCCAAAATTCGTTAGAAGCTACTTATGGATGGAAGTGTCAGATATGCTAAGCAAAAGTGCTATAACTTGTTCCAAGAAGATGTCTGAAATACGAACGCAGTACAGAAATATGGTGCGAGAAAAGCCTGATGAATTGACACAATGGCGGTTTCTGGATTTGTGCCAAAAAATCTATGGGACTGGCAAGAAAGGGAAGGCAGATGAATGA
Protein Sequence
MEPIVVKTEVQSNGEILLFYVDENGGNEEGVLTTVESIENHAIQLQQDSSFILPDMESDTDINLDLEENWSEDETKRLLVFYNDNKQTFITGTTKKKHLWTVACKTMLVGKNPSSCEVKLVSLRSKYFEICGHIQKGVYVKWPYFELCHQIFHDETEVVEATQVMKVPALQENYDNVMVVKKVNSRSTADEKVEIMLNLYLKYKKNFQQEYWRRGLWETIALEVGEEDGEYWQKRFLNYKQHYLRLLEKRRQTGPHGINWPYMELFDKIFEGDEEFQRKYLNENFEAIKNEVIVEPQALYNVDDWNTTETTVLVKYCFDCFDEFEDRTIPNNFLWNEIGRLLDKTPDACKEKYIELKSAHLDKYIEGGYSLRDRKPIAILFDNIISKEIDNQIAKTSNKPEQLELWKTEVLDDLVQFFYDNIEMYKDLLCHFVCWAAVTKKLNKSLQSCRSQWEDLVALYKTILNDKKENPDMQIDWRYIDVFDRIFDYGMDANLLAGYETMNGNGQNQKIGASGKIGVKKLNIKLDGSTEDFTDDEESFDERGFTKRTKRRSGDSKAFKILEYYQKNKDKFSTTNRNKHSLWEVLSKQIGISATQCAHRFRNLKQVYTAYVQREINKPEMPILWPYYALCKKVFGYRAIKSKLKHGKLDSDDSEDWSAKEIKQLINYFAQNFDDINSNVDDNSKWSDLAGEISKSETSCKEKFLELRKSYRKLKTMRSRNPDVKISWKYFNMFEQIYSVNEDGQEAMQVDDEQNAYLTIGSDTKIEQEEDDFQCIIVIPEGQDISQIESAQIIIQGPEQLQEPVENTATDVKQKPLVKWTKRTKKRLLIFYINYIRSHKGKEIKAKDMWAEIATKLTDKSPLSCRKMFAKLKANHKQIDELDPNMKKTPYYTLMEKVMRLKPKFTKTEKNKALKDGKIYKDVALPDNKVEQALQYYLENIEDFVSPRFEKKYLWTELANYVCEPITKVFNKINYLKQSYNINTDEISGEKTPFSDLLKSIITREEAVKLILENTPKPVVEDSGIEETWTDEETEQLLEWYLSNLEKFKNPKFVRSYLWMEVSDMLSKSAITCSKKMSEIRTQYRNMVREKPDELTQWRFLDLCQKIYGTGKKGKADE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01487655;
90% Identity
iTF_00001130;
80% Identity
-