Basic Information

Insect: Abrostola tripartita
Gene Symbol: clz9_1
Assembly: GCA_905340225.1
Location: HG996513.1:4606326-4609240[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 6.4e-08 2.9e-05 24.0 0.0 1 40 31 71 31 73 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	6.4e-08	2.9e-05	24.0	0.0	1	40	31	71	31	73	0.93

Sequence Information

Coding Sequence: ATGGTGAAACCGCAGAAAAGTAAACATAAATCTCGAATTGTACAAAGAAAGCCCAGACGTATAATGGGATCAAGAATGTATAAAAATTATACCGAAGAAATGCTAAAACTTGCATGTGAATCAGTAGAATCAGGCCAAATTTCATCGCGAGATGCTCAACGGCAATTTGGTATCGCAAGACGTACAATAGAAAATAAAATAAAAAACAAACATTTAAAGCCAGTTGGGCATCCTACTGTTTTATCAGCAGCGGAAGAGAACCAAATTGTAAAAGTCTTGCAAGCTTCTAGTGAATATGGCTCCCCACTCACTAAAGTGGATTTAAAGCTTTTAGTTCATGAATATCTTAAAAAAAATAGTAGAGATCATATATTAAAAAATCGGATTCCTGGTGATGCATGGGTGCAGGGTTTTCTGGCTAGGCATGCTAGTGAATTAACAGTAAGATCCACTCAAAACATTTCAAAGGCGCGAGCAGAAAAGGGACCACAAGAATTAGCTGATTATTTTGAAAATTTAAGCATGACATTAAAAGACATTCCAGCCGATAATATAGTCAACTTTGATGAGACCAACCTGTCGGACGAACCAGGTTCATCGAAGTGCATCTTTCGGAGAGGTGTTAAATATCCTGAAAGAATAGCCAATTCCACCAAAGGAAACATATCACTTATGTTTTCAGCTATTGCAAGTGGCAAATGTCTGCCGTTATATGTTGTTTATAAAGCAACAAATTTATACTCAGAATGGGTTAGTGGGGGGCCACCAGAAACCAGATATAATTGCACTAAATCGGGGTGGTTCGACAGCGCTATGTTTGAGAATTACTTTGAAACCATAATCCTGCCATGGGCAAGAAAGACTTCAGGGACTAAAGTTGTCATTTGCGACAACCTGTCTAGTCATTTGAGCGTTAAAGTGGTTGAGTTGTGTGAACAAAATGAAATTAGGTTTGTATTTATTCCTCCGCGGTCAACACACCTTACCCAGCCACTAGACGTGGCATTTTTTGCGCCTCTGAAGAAAGCCTGGCGTAAAATTTTGTACCAGTATAAGCTTCGTAATCCGAACCAAACTACCTTAAATAAAAAACATTTTCCGAAATTGCTTAATGAATTGATTGAATTAATCCAAATAAAGGAATCTAAGAATATAAAAAGTGGATTTCGAGCAGCCGGAATATTTCCGCTGAATCCTCAAGAAGTTCTAAAGAAGATCCCAGAAATGCAAGAAGAAATAATGTCGTATGGAATTGACCAAGCATTGGTAGACTATTTAAAGGAAACTAGAGCACCAAAGCCAATGCTAGTCAAAAGAAATAAAAAAATTAATTGTGAGCCAGGCAGATCAGTGACGGCTTCCGATCTAAATTCTTGCAAAATTAAAGCAGTTAACAAATCTTCCAGGGTGACAAAAAAGCAAAAAATAAATAACGACGTTTTATTTTTAGATGAAGCAACTGGGCTCTTTGTTGCTGCAACTGATGTCATATCAAAAGAAGATACTAATGAAAACCAAATGAGCATTTTTGATCGGGAAGGGCCTTTTTTAATTTCACATTATCAAGACTATACTTCTCCTGAATGTCTCAGTAAACTTTGCGTCACTGTAATTAACTCCTGCTTGGGTCAATTAGAAAACGGCAAAAAAATATCATCGGTGTTTACAGATTTTTCATACCAAACAACTTCCTTTTGCCAAAATCCTATCAAAAAGAACAAAGTAACTATTCTCTCCGATATTATTATTAAACCAAGAACATCAAATGTTTGCACTTTGAAGGAAGTGTCTAATAAAACTGAAAATACGCCGTTTGTTGCTACGTCGAAAACAGATTTACCAGATTGTCTGCAAGTGAAAAATGCAAAACATTTAAAAATAATCAAGAAGGAAGTTTCGAGGGAAGGAAAAAGTAATAATAGGAAACGTAGAGTGACTAAGAATACAAAGGGAGGAAGAAAGCCAGCTCGAAGGCGTACATCAGTGAAGAAAAGGAACGATACATCTGAAAGTGAAACAAGCTCGATGTTTGATGAGGTTGTAACAGTTGATACTGATGATTCAGATTTCAAAACAATGGATGACTACTTATCTGAATACATGCCGGAACTGGAAGAAAAAGAGAATTTTGAGCCATCTGATAATTTATTTGGATTGAATGAAATTGAATATTTTTCAGAAAACTATCAAAACATGGCAACAGGCGACTGGATTATTGCTCAATTTGCGACAAAAAAGACTTTAAAACATTTTGTAGGCAATGTTTTGGCAGTCAATGAAAAAATTCCTACAGTTAAGTTTGTAAGAAAGGTAAAACAATCGAAATGTCAACAGGGGACCACTTTCACGTACCCAATAGTTGATGACATTTGCACTATGCAATATTTAGAAGATATTATTTCGATACTACCGAAGCCGAAAATAACTCGACGTGGTCAATTCGTTTTCGATGTAGATTTCGGTAATTTTAACATTCAATAA
Protein Sequence: MVKPQKSKHKSRIVQRKPRRIMGSRMYKNYTEEMLKLACESVESGQISSRDAQRQFGIARRTIENKIKNKHLKPVGHPTVLSAAEENQIVKVLQASSEYGSPLTKVDLKLLVHEYLKKNSRDHILKNRIPGDAWVQGFLARHASELTVRSTQNISKARAEKGPQELADYFENLSMTLKDIPADNIVNFDETNLSDEPGSSKCIFRRGVKYPERIANSTKGNISLMFSAIASGKCLPLYVVYKATNLYSEWVSGGPPETRYNCTKSGWFDSAMFENYFETIILPWARKTSGTKVVICDNLSSHLSVKVVELCEQNEIRFVFIPPRSTHLTQPLDVAFFAPLKKAWRKILYQYKLRNPNQTTLNKKHFPKLLNELIELIQIKESKNIKSGFRAAGIFPLNPQEVLKKIPEMQEEIMSYGIDQALVDYLKETRAPKPMLVKRNKKINCEPGRSVTASDLNSCKIKAVNKSSRVTKKQKINNDVLFLDEATGLFVAATDVISKEDTNENQMSIFDREGPFLISHYQDYTSPECLSKLCVTVINSCLGQLENGKKISSVFTDFSYQTTSFCQNPIKKNKVTILSDIIIKPRTSNVCTLKEVSNKTENTPFVATSKTDLPDCLQVKNAKHLKIIKKEVSREGKSNNRKRRVTKNTKGGRKPARRRTSVKKRNDTSESETSSMFDEVVTVDTDDSDFKTMDDYLSEYMPELEEKENFEPSDNLFGLNEIEYFSENYQNMATGDWIIAQFATKKTLKHFVGNVLAVNEKIPTVKFVRKVKQSKCQQGTTFTYPIVDDICTMQYLEDIISILPKPKITRRGQFVFDVDFGNFNIQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -