Atri004402.1
Basic Information
- Insect
- Abrostola tripartita
- Gene Symbol
- JARID2
- Assembly
- GCA_905340225.1
- Location
- HG996486.1:18690807-18702658[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.7 1.5e+04 -3.3 0.0 45 68 314 337 306 349 0.69 2 2 6.8e-21 2.2e-17 63.5 0.0 6 88 802 881 798 882 0.90
Sequence Information
- Coding Sequence
- ATGAGGTCCCGCTCTCGTCGTGTGCAAGCACAGCGTAAGTTCGCGCAGGGTGCCTACATTCCACCAAATGCTGCACCCGCCGTGCCTGCCAATACCGAACGCCGGAAGAATACTCGGAACACTCGGAATGTTTACAAGCACAATGGGAATGCAACGTCCCTTCTGGACTACGTATCCTATCAATACCATCCAAGCCTTCAGCCGTATGTGCTTGTTGAAAAGTTACCCGAGCCGGTACCAAATCGTGTCATTCTCAATGGCCCAGAGAAAGAGCCCGAAAGAAACAAAGAGAGACATACTTCAGTGCAGAACAATAACGTTACAAAAACACGAAATATTACAAAGAAGATAAATACATTGCAGCGGGTTCATAGCATGTCTTTACGTTCAACTAAGACAAAGAATCAAAATTTGAACTTTTTAGAAACTGCAAGACGTATTACTACTAGACTTTTGGCTTCGAGACGCAAAGTACCGCCTCCAGAAAAACCAAAGGCCAAGAAAAAATTTACAAAATCACAGAAAAAGACGAAATCCCGCCTCGTCTCCACTGATTTCTCCGTGGACGACAACAGGCCGTTGGCTTATTTCCTTAAATCCAGCACTCCAAAACAGCCTGCTTGTCCACTCGTTGCCCTGACACCTTTAAATCCTCCAATGGAACCGGTGGCCGGCCCAAGTGGCTTACAAAAAGTGTCGAACTCGTACGTCTCGCTGCCAGGTCTTTCATCAACGCCATCCACTTCAGCATCATCCTCGCCATTGTTACCGAGGAGGACAACACACTTCAAACCCACGACAGCAGGAGTGCCAACACAATGTCGCACAAATAACAATGAAACATCAAGTAGCACGTTCTACACTGAACCAAACATTTATCGCTGGATGACAGGATCCATATCTGATGCTGGAAGACAAATGGTAACAGAAACTACAAATACTAATGACAACGTCTGCCCTGCATCGCCATGGAAGACCGTAAAAGAACTGATCAACGCTTCGCAAACTCAACTAGATTCTCGGTGCAGTAGATGCAGTAACTGCCTGAGAATAAATAATATCATAAAACTGTCCAAAGTTTTATTAGCTAATATCAAAGTTGACATGACGGGTGACGAGGTTACTGGGCGAGGCACCACGACAGCTATTAATGCTTACGCCTCGTTACATAATGATTGCCTGTATATAGAGTTAGTACCAAGGTTCGCCAATTCTGTAATGAAATTGCAATACCACGAGATTCTCGGCAATCATTTGTTATCTGGGTGTTTAATCCCTAGAAGCCATGCGCCTGCAGTTATTAATTACACGCTAGTGCAACAAGAAAACATACTAGAAAAGTTAAACCATACATTGCAACTCGTTGGTGCTCCTAAGTTCCTTCGCAGGGTCACCATAGACACCATTGTGAGCAATGAAAGCGATATAATTGCAACAGACCCTGAAAAAATATCTAGAATAAAAAACAATGAAATAAGAAGACGAGAAAAGTGTCGAAAGCTTATCGCAGCAAAAGAAAGGGTTATAGCTATGGCGTTAGAAGCTCGCCTTAAATCTGAGAAAGTTGCGGAATCGAGTGAAAGCACAACAGAAATAAGGAACGTAGAAGAGCAAGAGGCAATCATAATAACTGAAGAAGATGACGTGGCAGATAAGACAGGTGATGCCGATGAAGGAGGCGTTGTTGCCGATGAAGTAGGTAATGTGGTTAATGATGAAGGTAATATGGCAGATAATGAAGATTTCAGCATTCAACCAGAGAGGACTGAACAGATGACGAATGACGCTCCTAATGTTAATAATGAGGCTGAAGCGCTTGAGAGGCAAGCATCTCCGCAGGAGGAAAAAGAAAACGACGTGAACGAAACAAGCTCTGACGCGGGGGAATACTTACCGGAGGATACTCACCTCGTGTATGACGATTCTGAACCGCAAGACGAGAAAATCATACCTGTTACTGTATACTACGAACCTGGGCCCTCGACTTCGAATGCCGAACTGCCGAATGCGACAAACGAGGCCAGCTTGATGGATGAAGTGGATGCCCAAGCTAGAGCCCTAAAATTAGAAAAAGATGCAAAGGGAGACGATAGTATGGATGCAGGTCCCTCAGTAGGTCCCTCTGCAGCGGGTCGGTACCCGGCTGTGGCAGGTTTTCCGACCAGCGCCGAGAGTGCCAGAATCGTCGAAGCGCCAGTATATTTGCCTTCGCCTGAAGAATTTGAGGATCCTATTGTATATATTGAAAAAATCTGGAATGTAGCCTATAAATTTGGTATATGTAAAGTGATACCACCTGAAGGATGGCAGCCCCCGTGTACAATCAATGAGGACCTTCGATTCGATGTGTCAAACCAATATGTGTCCCGGTTCCTAAATCGCTGGGGCCCGGCGTCCAGGGAGATGAGTGCTATACGACTTTGTCTGCATCAACAGAATGTGAACGTAACGCGTCCGCCGCAGGTCGATGGCGTGGAAATCAATTTGCCGAGATTATACCACATCGTCCAACGTTATGGCGGATTGGAGAACGTTATAAATAAGAAACGATGGAGTAAGGTGGCGGAAGAGATGAAATTTGGCAAGACACCCGTTATAGAGAGGAAACTTGACCAAATTTATGTGAAATATTTACTGCCATATGCTACGCTCACACACCAGGAACGGCAGGAGATCATGAGCAAGGTTGAATCCGCGTGGCTAAAGAAGAATAACAAGCTTTTAGACCGCGCTTTGAACCCGTTTTATCGTCAGAAGCGTATGCTTGGTGAGCTGGAGTCTTCTGAAGGAGAGTCTGAGGACGAAGCCACTGGCAACGCGCTCATTGAAGCCGAGGACTGTGTTGTGAACGGCCAGGTCATGAACTTCGCCAAGTTTAAAAAAGTTGCTTTGAATGTTTACGAGAGCCACGTCGGCGAAAGCGTTTCTGGCAGGAATAATGCCACCAACGAATCACTGGAAGCAAAATATTGGCAACATGTTGTATTTGGCACTGAACATCTTTGTGTCAACACAGCCGCCATTGATACCGGCGAAGAAGGTCATGGCTTCCCTAAATACAATAAATCAGATGGTTACGGAATCAATCTTTGGAATCTGAAGTTGTTCAACACAAATCCTCGCAACTACCTGCGTTACTTGGGCTCCGTCCTCGGAGTGACAGTGCCGACGCTGCACCTCGCAATGCTCTACTCCACGAGCTGCTGGCACAAAGATCCTCACGCGTTGTGCTGGAACGAATACATGCATAGTGGTGCCGATAAGATTTGGTACGGGATTCCAGACGACCAATCGGATAACTTCAGGAAGGCGGTAGAGACTCTGACCCCAACGTCTTGTCAGAACAAGTCTCTGTGGCTGTCCACCGACATCGCCATGATTCCTCCTAACATCCTGCGCGAGCACAACGTGTCGCTCACCCGCGCAGTGCAGGTCCCCGGAGAGTACGTGTTCGTGTTCCCTAAGGCCTACTCGTGCTCTATCAGCACGGGCTACAGCGAGTCCGAGAGCGTATATTTTGCGCCTAAGTCTTGGCTAGACAACATCTCGCAAGTTATTCAGGAAACCCGTGAGAGCTGCGAGCCGACTATGTTCTCTTTAGAACAGCTGCTCATCGAAATGAGCAAAGACCCGAAAATCGATCTGTGTGATCTTAAGAAAATACAACCCACACTCGATAAAATCATAACCGAAGAATTAAACAACCGCGTGAAGTTACAGAAGCATGGGCTCAAGTTTACATACGGGGGTGAAAATACTTCACGAAAGAAGCTTAACACCAGCACGTGGAACGCTCGTGATAAGGAATGCGACTACTGCAGGGCTTACTTGTACCTCTCTAAGGTACAAGGGCTCACTGACAAGAAATCGTCTCTGTGCCTAGAGCACACGCTCAAATTACTGAGCACCAATAAACACAAGAAGCTGAACATAGCGCCGGTAGAAGTGTTCGTGTACGTAGCCAATCGAGAGCTGAACGAAGTGACCGACAGTATAAAGGCTCGCCTCCGTTCAGACTCCTCCTAG
- Protein Sequence
- MRSRSRRVQAQRKFAQGAYIPPNAAPAVPANTERRKNTRNTRNVYKHNGNATSLLDYVSYQYHPSLQPYVLVEKLPEPVPNRVILNGPEKEPERNKERHTSVQNNNVTKTRNITKKINTLQRVHSMSLRSTKTKNQNLNFLETARRITTRLLASRRKVPPPEKPKAKKKFTKSQKKTKSRLVSTDFSVDDNRPLAYFLKSSTPKQPACPLVALTPLNPPMEPVAGPSGLQKVSNSYVSLPGLSSTPSTSASSSPLLPRRTTHFKPTTAGVPTQCRTNNNETSSSTFYTEPNIYRWMTGSISDAGRQMVTETTNTNDNVCPASPWKTVKELINASQTQLDSRCSRCSNCLRINNIIKLSKVLLANIKVDMTGDEVTGRGTTTAINAYASLHNDCLYIELVPRFANSVMKLQYHEILGNHLLSGCLIPRSHAPAVINYTLVQQENILEKLNHTLQLVGAPKFLRRVTIDTIVSNESDIIATDPEKISRIKNNEIRRREKCRKLIAAKERVIAMALEARLKSEKVAESSESTTEIRNVEEQEAIIITEEDDVADKTGDADEGGVVADEVGNVVNDEGNMADNEDFSIQPERTEQMTNDAPNVNNEAEALERQASPQEEKENDVNETSSDAGEYLPEDTHLVYDDSEPQDEKIIPVTVYYEPGPSTSNAELPNATNEASLMDEVDAQARALKLEKDAKGDDSMDAGPSVGPSAAGRYPAVAGFPTSAESARIVEAPVYLPSPEEFEDPIVYIEKIWNVAYKFGICKVIPPEGWQPPCTINEDLRFDVSNQYVSRFLNRWGPASREMSAIRLCLHQQNVNVTRPPQVDGVEINLPRLYHIVQRYGGLENVINKKRWSKVAEEMKFGKTPVIERKLDQIYVKYLLPYATLTHQERQEIMSKVESAWLKKNNKLLDRALNPFYRQKRMLGELESSEGESEDEATGNALIEAEDCVVNGQVMNFAKFKKVALNVYESHVGESVSGRNNATNESLEAKYWQHVVFGTEHLCVNTAAIDTGEEGHGFPKYNKSDGYGINLWNLKLFNTNPRNYLRYLGSVLGVTVPTLHLAMLYSTSCWHKDPHALCWNEYMHSGADKIWYGIPDDQSDNFRKAVETLTPTSCQNKSLWLSTDIAMIPPNILREHNVSLTRAVQVPGEYVFVFPKAYSCSISTGYSESESVYFAPKSWLDNISQVIQETRESCEPTMFSLEQLLIEMSKDPKIDLCDLKKIQPTLDKIITEELNNRVKLQKHGLKFTYGGENTSRKKLNTSTWNARDKECDYCRAYLYLSKVQGLTDKKSSLCLEHTLKLLSTNKHKKLNIAPVEVFVYVANRELNEVTDSIKARLRSDSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -